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dpb/backend/app/api/v1/module_bre/trait_observation/service.py
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from typing import Any
from fastapi import UploadFile
from sqlalchemy.ext.asyncio import AsyncSession
from app.core.base_schema import AuthSchema, PageResultSchema, ImportResultSchema
from app.core.exceptions import CustomException
from app.core.logger import logger
from app.utils.common_util import search_to_dict
from app.utils.excel_util import ExcelUtil
from .crud import BreedingTraitObservationCRUD
from .schema import (
TraitObservationCreateSchema,
TraitObservationOutSchema,
TraitObservationQueryParam,
TraitObservationUpdateSchema,
)
from app.api.v1.module_bre.tree_evaluation.crud import BreedingTreeEvaluationCRUD
from app.api.v1.module_bre.tree.crud import BreedingTreeCRUD
from app.api.v1.module_bre.cross_combination.crud import BreedingCrossCombinationCRUD
from app.api.v1.module_bre.trait.crud import BreedingTraitCRUD
from app.core.base_crud import assert_no_children, assert_parents_exist
from app.api.v1.module_bre.cross_combination.model import CrossCombinationModel
from app.api.v1.module_bre.trait.model import TraitModel
from app.api.v1.module_bre.tree_evaluation.model import TreeEvaluationModel
from app.api.v1.module_bre.tree.model import TreeModel
def _is_blank(v: Any) -> bool:
return v is None or (isinstance(v, str) and v.strip() == "")
def _none_if_blank(v: Any) -> Any:
if _is_blank(v):
return None
return str(v).strip() if isinstance(v, str) else v
def _to_float(v: Any) -> float | None:
if _is_blank(v):
return None
try:
return float(v)
except (TypeError, ValueError):
return None
def _to_int(v: Any) -> int | None:
if _is_blank(v):
return None
try:
return int(float(v))
except (TypeError, ValueError):
return None
class TraitObservationService:
"""性状观测 模块服务层"""
def __init__(self, auth: AuthSchema, db: AsyncSession) -> None:
self.auth = auth
self.db = db
async def _assert_numeric_range(self, trait_id: int | None, value_numeric: float | None) -> None:
"""数值观测必须在性状 valid_min/valid_max 区间内,越界拒绝入库。"""
if trait_id is None or value_numeric is None:
return
trait = await BreedingTraitCRUD(self.auth, self.db).get(id=trait_id)
if not trait:
return # assert_parents_exist 已拦截不存在的性状,这里仅兜底
if trait.valid_min is not None and value_numeric < float(trait.valid_min):
raise CustomException(msg=f"数值 {value_numeric} 低于性状有效下限 {trait.valid_min}")
if trait.valid_max is not None and value_numeric > float(trait.valid_max):
raise CustomException(msg=f"数值 {value_numeric} 超出性状有效上限 {trait.valid_max}")
async def _assert_stage_gate(self, data: Any, exclude_id: int | None = None, eff_stage_override: str | None = None) -> None:
"""成株性状门禁(A6):实生苗(童期)单株不可录成株(evaluation)性状。
判定阶段取观测自带 stage,缺省继承 bre_trait.stage;观测显式 stage=juvenile
视为童期评估可放行。单株已选优晋级(sp/ap/line…)或非实生苗不受限。
update 走 eff_stage_overridedata.stage 或既有行 stage),避免部分更新误判。
"""
tree_id = getattr(data, "tree_id", None)
trait_id = getattr(data, "trait_id", None)
if not tree_id or not trait_id:
return
tree = await BreedingTreeCRUD(self.auth, self.db).get(id=tree_id)
if not tree or (getattr(tree, "stage", None) or "") != "seedling":
return
trait = await BreedingTraitCRUD(self.auth, self.db).get(id=trait_id)
if not trait:
return
eff_stage = eff_stage_override or getattr(data, "stage", None) or trait.stage or "evaluation"
if eff_stage == "evaluation":
tree_no = getattr(tree, "tree_no", None) or f"#{tree.id}"
raise CustomException(
msg=f"实生苗(童期)单株 {tree_no} 不可记录成株性状「{trait.trait_name}」;"
f"请将观测阶段改为 juvenile 评估,或先将单株选优晋级(sp/ap/line)"
)
async def _attach_fk_labels(self, items: list[TraitObservationOutSchema]) -> None:
if not items:
return
crud = BreedingTraitObservationCRUD(self.auth, self.db)
evaluation_id_ids = {getattr(it, "evaluation_id") for it in items if getattr(it, "evaluation_id")}
if evaluation_id_ids:
refs = await BreedingTreeEvaluationCRUD(self.auth, self.db).get_list(search={"id": ("in", list(evaluation_id_ids))})
ref_map = {r.id: getattr(r, "evaluate_date") for r in refs}
for it in items:
it.evaluation_name = ref_map.get(getattr(it, "evaluation_id"))
tree_id_ids = {getattr(it, "tree_id") for it in items if getattr(it, "tree_id")}
if tree_id_ids:
refs = await BreedingTreeCRUD(self.auth, self.db).get_list(search={"id": ("in", list(tree_id_ids))})
ref_map = {r.id: getattr(r, "tree_no") for r in refs}
for it in items:
it.tree_name = ref_map.get(getattr(it, "tree_id"))
combination_id_ids = {getattr(it, "combination_id") for it in items if getattr(it, "combination_id")}
if combination_id_ids:
refs = await BreedingCrossCombinationCRUD(self.auth, self.db).get_list(search={"id": ("in", list(combination_id_ids))})
ref_map = {r.id: getattr(r, "combination_code") for r in refs}
for it in items:
it.combination_name = ref_map.get(getattr(it, "combination_id"))
trait_id_ids = {getattr(it, "trait_id") for it in items if getattr(it, "trait_id")}
if trait_id_ids:
refs = await BreedingTraitCRUD(self.auth, self.db).get_list(search={"id": ("in", list(trait_id_ids))})
ref_map = {r.id: getattr(r, "trait_name") for r in refs}
for it in items:
it.trait_name = ref_map.get(getattr(it, "trait_id"))
async def detail(self, id: int) -> TraitObservationOutSchema:
obj = await BreedingTraitObservationCRUD(self.auth, self.db).get(id=id)
if not obj:
raise CustomException(msg="该性状观测不存在")
out = TraitObservationOutSchema.model_validate(obj)
await self._attach_fk_labels([out])
return out
async def get_list(
self,
search: TraitObservationQueryParam | None = None,
order_by: list[dict[str, str]] | None = None,
) -> list[TraitObservationOutSchema]:
obj_list = await BreedingTraitObservationCRUD(self.auth, self.db).get_list(
search=search_to_dict(search), order_by=order_by
)
outs = [TraitObservationOutSchema.model_validate(obj) for obj in obj_list]
await self._attach_fk_labels(outs)
return outs
async def page(
self,
page_no: int,
page_size: int,
search: TraitObservationQueryParam | None = None,
order_by: list[dict[str, str]] | None = None,
) -> PageResultSchema[TraitObservationOutSchema]:
offset = (page_no - 1) * page_size
result = await BreedingTraitObservationCRUD(self.auth, self.db).page(
offset=offset,
limit=page_size,
order_by=order_by or [{"id": "asc"}],
search=search_to_dict(search, {}),
out_schema=TraitObservationOutSchema,
)
await self._attach_fk_labels(result.items)
return result
async def create(self, data: TraitObservationCreateSchema) -> TraitObservationOutSchema:
await assert_parents_exist(
self.db,
[
(TreeEvaluationModel, data.evaluation_id, '单株评价'),
(TreeModel, data.tree_id, '单株'),
(CrossCombinationModel, data.combination_id, '杂交组合'),
(TraitModel, data.trait_id, '性状'),
],
)
# 缺省继承性状发育阶段(schema 注释约定):data.stage 留空时以 bre_trait.stage 回填落库
if data.stage is None and data.trait_id is not None:
_trait = await BreedingTraitCRUD(self.auth, self.db).get(id=data.trait_id)
if _trait and _trait.stage:
data = data.model_copy(update={"stage": _trait.stage})
# 同一次鉴定下同一单株同一性状只允许一条观测(tree_id 为空表示组合级观测,跳过判重)
if data.tree_id is not None:
dup = await BreedingTraitObservationCRUD(self.auth, self.db).get(
evaluation_id=data.evaluation_id, tree_id=data.tree_id, trait_id=data.trait_id
)
if dup:
raise CustomException(msg="创建失败,该单株在此次鉴定中已存在该性状观测")
await self._assert_numeric_range(data.trait_id, data.value_numeric)
await self._assert_stage_gate(data)
obj = await BreedingTraitObservationCRUD(self.auth, self.db).create(data=data)
out = TraitObservationOutSchema.model_validate(obj)
await self._attach_fk_labels([out])
return out
async def update(self, id: int, data: TraitObservationUpdateSchema) -> TraitObservationOutSchema:
obj = await BreedingTraitObservationCRUD(self.auth, self.db).get(id=id)
if not obj:
raise CustomException(msg="更新失败,该性状观测不存在")
await assert_parents_exist(
self.db,
[
(TreeEvaluationModel, data.evaluation_id, '单株评价'),
(TreeModel, data.tree_id, '单株'),
(CrossCombinationModel, data.combination_id, '杂交组合'),
(TraitModel, data.trait_id, '性状'),
],
)
# 更新后 (evaluation_id, tree_id, trait_id) 仍需唯一(未提交的字段取现值)
eval_id = data.evaluation_id if data.evaluation_id is not None else obj.evaluation_id
tree_id = data.tree_id if data.tree_id is not None else obj.tree_id
trait_id = data.trait_id if data.trait_id is not None else obj.trait_id
if tree_id is not None:
dup = await BreedingTraitObservationCRUD(self.auth, self.db).get(
evaluation_id=eval_id, tree_id=tree_id, trait_id=trait_id
)
if dup and dup.id != id:
raise CustomException(msg="更新失败,该单株在此次鉴定中已存在该性状观测")
await self._assert_numeric_range(
data.trait_id if data.trait_id is not None else obj.trait_id,
data.value_numeric if data.value_numeric is not None else obj.value_numeric,
)
await self._assert_stage_gate(
data, exclude_id=id, eff_stage_override=(data.stage or obj.stage)
)
obj = await BreedingTraitObservationCRUD(self.auth, self.db).update(id=id, data=data)
out = TraitObservationOutSchema.model_validate(obj)
await self._attach_fk_labels([out])
return out
async def delete(self, ids: list[int]) -> None:
if not ids:
raise CustomException(msg="删除失败,删除对象不能为空")
objs = await BreedingTraitObservationCRUD(self.auth, self.db).get_list(search={"id": ("in", ids)})
obj_map = {o.id: o for o in objs}
for id_ in ids:
if id_ not in obj_map:
raise CustomException(msg="删除失败,该性状观测不存在")
await BreedingTraitObservationCRUD(self.auth, self.db).delete(ids=ids)
async def list_options(self) -> list[dict[str, Any]]:
"""供前端下拉选择使用:返回 [{value, label}]。"""
obj_list = await BreedingTraitObservationCRUD(self.auth, self.db).get_list(order_by=[{"id": "asc"}])
return [{"value": o.id, "label": o.value_text} for o in obj_list]
@staticmethod
def batch_export(obj_list: list[dict[str, Any]]) -> bytes:
mapping_dict = {
"evaluation_name": "所属鉴定",
"tree_name": "单株",
"combination_name": "杂交组合",
"trait_name": "性状",
"evaluate_year": "观测年份",
"value_numeric": "数值",
"value_text": "文本值",
"value_date": "日期值",
"stage": "阶段",
"remark": "备注",
"created_time": "创建时间",
"created_by": "创建者",
}
data = [dict(item) for item in obj_list]
for item in data:
creator = item.get("created_by")
item["created_by"] = creator.get("name", "未知") if isinstance(creator, dict) else "未知"
return ExcelUtil.export_list2excel(list_data=data, mapping_dict=mapping_dict)
async def batch_import(self, file: UploadFile, update_support: bool = False) -> ImportResultSchema:
header_dict = {
"所属鉴定": "evaluation_id",
"单株": "tree_id",
"杂交组合": "combination_id",
"性状": "trait_id",
"观测年份": "evaluate_year",
"数值": "value_numeric",
"文本值": "value_text",
"日期值": "value_date",
"阶段": "stage",
"备注": "remark",
}
try:
contents = await file.read()
rows = ExcelUtil.read_excel_to_dicts(contents)
await file.close()
if not rows:
raise CustomException(msg="导入文件为空")
missing_headers = [h for h in header_dict if h not in rows[0]]
if missing_headers:
raise CustomException(msg=f"导入文件缺少必要的列: {', '.join(missing_headers)}")
evaluation_id_refs = await BreedingTreeEvaluationCRUD(self.auth, self.db).get_list(order_by=[{"id": "asc"}])
evaluation_id_map = {getattr(r, "evaluate_date"): r.id for r in evaluation_id_refs}
tree_id_refs = await BreedingTreeCRUD(self.auth, self.db).get_list(order_by=[{"id": "asc"}])
tree_id_map = {getattr(r, "tree_no"): r.id for r in tree_id_refs}
combination_id_refs = await BreedingCrossCombinationCRUD(self.auth, self.db).get_list(order_by=[{"id": "asc"}])
combination_id_map = {getattr(r, "combination_code"): r.id for r in combination_id_refs}
trait_id_refs = await BreedingTraitCRUD(self.auth, self.db).get_list(order_by=[{"id": "asc"}])
trait_id_map = {getattr(r, "trait_name"): r.id for r in trait_id_refs}
trait_valid_map = {r.id: (r.valid_min, r.valid_max) for r in trait_id_refs}
mapped_rows = []
for row in rows:
mapped_rows.append({en: row.get(ch) for ch, en in header_dict.items()})
required_fields = ["trait_id"]
errors = []
for field in required_fields:
missing_indices = [i + 1 for i, r in enumerate(mapped_rows) if _is_blank(r.get(field))]
if missing_indices:
field_name = next(k for k, v in header_dict.items() if v == field)
rows_str = "、".join(str(i) for i in missing_indices)
errors.append(f"{field_name}不能为空,第{rows_str}行")
if errors:
raise CustomException(msg=f"导入失败,以下行缺少必要字段:\n{'; '.join(errors)}")
error_msgs: list[str] = []
success_count = 0
crud = BreedingTraitObservationCRUD(self.auth, self.db)
for i, row in enumerate(mapped_rows, start=1):
try:
evaluation_id_val = evaluation_id_map.get(str(row.get("evaluation_id")).strip()) if not _is_blank(row.get("evaluation_id")) else None
tree_id_val = tree_id_map.get(str(row.get("tree_id")).strip()) if not _is_blank(row.get("tree_id")) else None
combination_id_val = combination_id_map.get(str(row.get("combination_id")).strip()) if not _is_blank(row.get("combination_id")) else None
trait_id_val = trait_id_map.get(str(row.get("trait_id")).strip()) if not _is_blank(row.get("trait_id")) else None
fields = {
"evaluation_id": evaluation_id_val,
"tree_id": tree_id_val,
"combination_id": combination_id_val,
"trait_id": trait_id_val,
"evaluate_year": _to_int(row.get("evaluate_year")),
"value_numeric": _to_float(row.get("value_numeric")),
"value_text": _none_if_blank(row.get("value_text")),
"value_date": _none_if_blank(row.get("value_date")),
"stage": _none_if_blank(row.get("stage")),
"remark": _none_if_blank(row.get("remark")),
}
if fields["value_numeric"] is not None and trait_id_val is not None:
vmin, vmax = trait_valid_map.get(trait_id_val, (None, None))
if vmin is not None and fields["value_numeric"] < float(vmin):
error_msgs.append(f"第{i}行: 数值 {fields['value_numeric']} 低于性状有效下限 {vmin}")
continue
if vmax is not None and fields["value_numeric"] > float(vmax):
error_msgs.append(f"第{i}行: 数值 {fields['value_numeric']} 超出性状有效上限 {vmax}")
continue
create_data = TraitObservationCreateSchema(**fields)
if tree_id_val is not None:
dup = await crud.get(
evaluation_id=evaluation_id_val, tree_id=tree_id_val, trait_id=trait_id_val
)
if dup:
if update_support:
await crud.update(id=dup.id, data=TraitObservationUpdateSchema(**fields))
success_count += 1
else:
error_msgs.append(f"第{i}行: 该单株在此次鉴定中已存在该性状观测")
continue
await crud.create(data=create_data)
success_count += 1
except Exception as e:
error_msgs.append(f"第{i}行: {e!s}")
continue
return ImportResultSchema(
valid_count=success_count,
invalid_count=len(error_msgs),
message_list=error_msgs,
)
except Exception as e:
logger.error(f"批量导入性状观测失败: {e!s}")
raise CustomException(msg=f"导入失败: {e!s}")
@staticmethod
def import_template_download() -> bytes:
header_list = [
"所属鉴定",
"单株",
"杂交组合",
"性状",
"观测年份",
"数值",
"文本值",
"日期值",
"阶段",
"备注",
]
selector_header_list = []
option_list = [
]
return ExcelUtil.get_excel_template(
header_list=header_list,
selector_header_list=selector_header_list,
option_list=option_list,
)