init: 初始化 dpb 桃育种系统代码库

前后端 + 后端 FastAPI 全量源码、部署脚本与文档。

backend/pyproject.toml

@@ -0,0 +1,136 @@
+[project]
+name = "backend"
+version = "2.0.0"
+description = "fastapiadmin后端工程"
+readme = "README.md"
+requires-python = ">=3.12"
+dependencies = [
+    "agno==2.5.8",
+    "aiofiles==24.1.0",                         # 文件操作
+    "alembic==1.18.4",                          # 数据库迁移
+    "apscheduler==3.11.0",                      # 定时任务
+    "bleach==6.4.0",                            # 过滤 HTML 标签
+    "click==8.1.7",                             # 命令行参数解析
+    "croniter==6.2.4",                          # cron 表达式校验
+    "fastapi==0.138.2",                         # fastapi 框架
+    "greenlet==3.5.2",                          # 协程核心依赖（SQLAlchemy 异步）
+    "httpx==0.28.1",                            # HTTP 客户端
+    "jinja2==3.1.6",                            # 模板引擎（代码生成 + 遗留模板）
+    "loguru==0.7.3",                            # 日志
+    "numpy==2.5.1",                             # 数值计算（BLUP 引擎）
+    "openpyxl==3.1.5",                          # Excel 文件处理
+    "psutil==7.2.2",                            # 系统信息
+    "pydantic-settings>=2.6.1",                 # 配置设置
+    "pyjwt==2.13.0",                            # OAuth2
+    "python-multipart==0.0.32",                 # request.form() 对表单进行「解析」时安装
+    "redis==7.1.0",                             # redis 异步操作数据库
+    "rich==15.0.0",                             # 终端打印美化
+    "sqlalchemy==2.0.51",                       # 数据库ORM
+    "sqlglot[rs]==27.8.0",                      # sql 解析
+    "tinycss2==1.5.1",                          # bleach CSS 清洗依赖
+    "typer==0.26.7",                            # 命令行工具
+    "ua-parser==1.0.2",                         # 解析 User-Agent 获取 OS/浏览器
+    "uvicorn==0.49.0",                          # uvicorn web 框架
+    "websockets>=16.0,<17.0",                   # websocket 通信
+    "asyncpg==0.31.0",                          # PostgreSQL 异步驱动
+    "psycopg[binary]==3.3.2",                   # PostgreSQL 同步驱动（含预编译 libpq）
+    "openai==2.46.0",
+    "pydantic[email]>=2.12.5",
+]
+
+[project.optional-dependencies]
+postgres = ["asyncpg==0.31.0"]
+
+[dependency-groups]
+dev = [
+    "aiosqlite==0.22.1",      # 测试：SQLite 内存库（conftest 固定 DATABASE_TYPE=sqlite，勿移除）
+    "fakeredis>=2.21.0,<3",   # 测试：内存 Redis，配合 TESTING
+    "pytest==9.0.2",
+    "pytest-asyncio>=0.24.0",  # 异步测试支持
+    "ruff==0.14.13",          # 代码检查/格式化
+]
+
+[tool.uv]
+default-groups = ["dev"]     # 本地 uv sync 含 dev；生产 pip -r requirements.txt 不含 pytest/ruff/fakeredis
+
+[[tool.uv.index]]
+name = "tuna"
+url = "https://pypi.tuna.tsinghua.edu.cn/simple"
+
+[tool.ruff]
+line-length = 200
+indent-width = 4
+preview = false
+fix = true
+show-fixes = true
+exclude = [
+    ".bzr",
+    ".direnv",
+    ".eggs",
+    ".git",
+    ".git-rewrite",
+    ".hg",
+    ".ipynb_checkpoints",
+    ".mypy_cache",
+    ".nox",
+    ".pants.d",
+    ".pyenv",
+    ".pytest_cache",
+    ".pytype",
+    ".ruff_cache",
+    ".svn",
+    ".tox",
+    ".venv",
+    ".vscode",
+    "__pypackages__",
+    "_build",
+    "buck-out",
+    "build",
+    "dist",
+    "node_modules",
+    "site-packages",
+    "venv",
+]
+extend-include = ["*.pyw"]
+
+[tool.ruff.lint]
+select = [
+    "FAST",
+    "F",
+    "E",
+    "W",
+    "F",
+    "I",
+    "B",
+    "C4",
+    "UP",
+]
+ignore = [
+    "E501",  # line too long, handled by black
+    "B008",  # do not perform function calls in argument defaults
+    "C901",  # too complex
+    "W191",  # indentation contains tabs
+    "B904",  # Within an `except` clause
+    "B010",  # Do not call with a constant attribute value.
+    "B009",  # Do not use getattr() with a constant attribute value.
+    "E712",  # Avoid equality comparisons to `False`; use `not getattr(self.model, "is_deleted"):` for false checks
+    "W293",  # blank line with whitespace
+]
+
+[tool.ruff.lint.per-file-ignores]
+"tests/conftest.py" = ["E402"]  # 先设置 TESTING/SQLite 环境再 import 应用
+
+[tool.ruff.format]
+docstring-code-format = true
+preview = false
+quote-style = "double"
+indent-style = "space"
+skip-magic-trailing-comma = false
+line-ending = "auto"
+
+[tool.pytest.ini_options]
+asyncio_mode = "auto"
+asyncio_default_fixture_loop_scope = "function"
+markers = [
+    "pg: 依赖真实 PostgreSQL16 + Redis 的统计引擎正式 tc 套件（pytest -m pg 触发；run_ci.py 验收门）",
+]